The predominance of this module will be exploring the how genomic technologies provide insight into pathogen dynamics and host response.

Databases

NCBI
JGI
Sigenae
OrthoDB

matzLab
crassostreome



Software

Galaxy
https://main.g2.bx.psu.edu/
-Please obtain account and explore tutorials

Sequence Analysis tools @ NCBI http://www.ncbi.nlm.nih.gov/guide/sequence-analysis/
- ie BLAST, PrimerDesign

Google Docs (Drive)
https://drive.google.com

Geneious
http://www.geneious.com/
-Free version available - consider Pro Trial during later half of class.

CLC Sequence Viewer http://www.clcbio.com/index.php?id=479
-Free multi-platform



My Favorite Gene Projects





Data Servers




Galaxy Public / Shared Histories








Exercises and How-to